SRX181461
GSM994749: SUDHL6 DMSO EZH2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EZH2

Cell type

Cell type Class
Blood
Cell type
SU-DHL-6
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma

Attributes by original data submitter

Sample

source_name
Diffuse large B cell lymphoma
treatment
DMSO
cell line
SUDHL6
chip antibody
EZH2
chip antibody manufacturer
Cell Signaling

Sequenced DNA Library

library_name
GSM994749: SUDHL6 DMSO EZH2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
45263280
Reads aligned (%)
92.5
Duplicates removed (%)
18.5
Number of peaks
879 (qval < 1E-05)

hg19

Number of total reads
45263280
Reads aligned (%)
91.9
Duplicates removed (%)
19.4
Number of peaks
1309 (qval < 1E-05)

Base call quality data from DBCLS SRA