SRX180897
GSM992735: Day 0 input DNA; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
AT2
NA
NA

Attributes by original data submitter

Sample

source_name
Alveolar Epithelial type 2 (AT2 cell)
Sex
female
cod
anoxia
cell type
Primary isolated AT2 cells
chip antibody
none

Sequenced DNA Library

library_name
GSM992735: Day 0 input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25295960
Reads aligned (%)
95.8
Duplicates removed (%)
1.8
Number of peaks
914 (qval < 1E-05)

hg19

Number of total reads
25295960
Reads aligned (%)
94.9
Duplicates removed (%)
3.1
Number of peaks
1104 (qval < 1E-05)

Base call quality data from DBCLS SRA