SRX180817
GSM992420: HUES6; Homo sapiens; Bisulfite-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Bisulfite-Seq
Antigen
Bisulfite-Seq

Cell type

Cell type Class
Pluripotent stem cell
Cell type
hESC HUES6
NA
NA

Attributes by original data submitter

Sample

source_name
HUES6
cell type
Human embryonic stem cells
laboratory of generation
NA
reprogramming experiment
NA
reprogramming factors
NA
passage number
26

Sequenced DNA Library

library_name
GSM992420: HUES6
library_strategy
Bisulfite-Seq
library_source
GENOMIC
library_selection
RANDOM

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
11951070
Reads aligned (%)
93.3
Coverage rate (×)
0.8
Number of hyper MRs
29953 (qval < 1E-05)

hg19

Number of total reads
11951070
Reads aligned (%)
93.5
Coverage rate (×)
0.9
Number of hyper MRs
30959 (qval < 1E-05)

Base call quality data from DBCLS SRA