Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Neural
Cell type
Cerebellar Cortex
MeSH Description
The superficial GRAY MATTER of the CEREBELLUM. It consists of two main layers, the stratum moleculare and the stratum granulosum.

Attributes by original data submitter

Sample

strain
C57BL/6
age
2-3 months
sex
male
tissue
Cortex
genotype
Mecp2 Flag
replicate
replicate2

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

mm10

Number of total reads
139070850
Reads aligned (%)
95.7
Duplicates removed (%)
63.8
Number of peaks
520 (qval < 1E-05)

mm9

Number of total reads
139070850
Reads aligned (%)
95.4
Duplicates removed (%)
63.8
Number of peaks
548 (qval < 1E-05)

Base call quality data from DBCLS SRA