SRX1802627
H3K27me3 ChIP-Seq of high grade serous ovarian cancer

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Gonad
Cell type
Ovarian cancer
NA
NA

Attributes by original data submitter

Sample

isolate
not applicable
age
not applicable
biomaterial_provider
Cancer Biology Research Center, 1095 Jiefang Anv. Wuhan, 430030, China
sex
female
tissue
ovary (high grade serous ovarian cancer)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
31163790
Reads aligned (%)
97.6
Duplicates removed (%)
5.0
Number of peaks
503 (qval < 1E-05)

hg19

Number of total reads
31163790
Reads aligned (%)
96.8
Duplicates removed (%)
6.6
Number of peaks
571 (qval < 1E-05)

Base call quality data from DBCLS SRA