SRX176643
GSM985135: H4K16ac 3mM sodium bicarbonate; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K16ac

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
H4K16ac 3mM sodium bicarbonate
antibody
H4K16ac active motif (39167)
agent
3mM sodium bicarbonate
cell line
HeLa

Sequenced DNA Library

library_name
GSM985135: H4K16ac 3mM sodium bicarbonate
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
39670956
Reads aligned (%)
87.9
Duplicates removed (%)
39.3
Number of peaks
792 (qval < 1E-05)

hg19

Number of total reads
39670956
Reads aligned (%)
86.6
Duplicates removed (%)
40.2
Number of peaks
482 (qval < 1E-05)

Base call quality data from DBCLS SRA