Antigen

Antigen Class

TFs and others

Antigen

Batf

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

source_name

Th17 Cells

strain

C57BL/6

cell type

Th17 Cells

tissue

Spleen

chip antibody

BATF (from Ken Murphy [rabbit ], not commercial available)

Sequenced DNA Library

library_name

GSM978767: Th17 BatF

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

20247357

Reads aligned (%)

90.9

Duplicates removed (%)

61.1

Number of peaks

12218 (qval < 1E-05)

mm9

Number of total reads

20247357

Reads aligned (%)

90.8

Duplicates removed (%)

61.2

Number of peaks

12203 (qval < 1E-05)