Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
Blood
tissue
Blood
developmental stage
Adult
genotype/variation
wild type
cell type
HSC
chip antibody details
Santa Cruz, SC-585X, lot D1509

Sequenced DNA Library

library_name
GSM971334: HSC_p300
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
12480960
Reads aligned (%)
56.0
Duplicates removed (%)
7.2
Number of peaks
522 (qval < 1E-05)

hg38

Number of total reads
12480960
Reads aligned (%)
56.7
Duplicates removed (%)
7.1
Number of peaks
509 (qval < 1E-05)

Base call quality data from DBCLS SRA