Antigen

Antigen Class

TFs and others

Antigen

SMARCA4

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Blood

tissue

Blood

developmental stage

Adult

genotype/variation

wild type

cell type

HSC

chip antibody details

Anti-Brg1 (Khavari, P. A., et al., 1993, Nature, 366:170-174)

Sequenced DNA Library

library_name

GSM971333: HSC_Brg1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

hg38

Number of total reads

20170056

Reads aligned (%)

51.3

Duplicates removed (%)

10.8

Number of peaks

6119 (qval < 1E-05)

hg19

Number of total reads

20170056

Reads aligned (%)

50.9

Duplicates removed (%)

11.1

Number of peaks

6139 (qval < 1E-05)