Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MLLT1

Cell type

Cell type Class
Blood
Cell type
MOLM-13
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
MOLM-13
cell line
MOLM-13
cell type
acute myeloid leukemia
chip antibody
ENL (Cell Signaling Technology, #14893)

Sequenced DNA Library

library_name
GSM6448428
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Fixed numbers of mouse or drosophila cells were spiked-in to treated cells. Cells were then lysed. Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with antibody. Libraries were prepared with Takara ThruPLEX® DNA-Seq Kit (Cat. No. R400674) according to manufacturer's instructions.

Sequencing Platform

instrument_model
NextSeq 2000

hg38

Number of total reads
39925583
Reads aligned (%)
85.2
Duplicates removed (%)
38.3
Number of peaks
1233 (qval < 1E-05)

hg19

Number of total reads
39925583
Reads aligned (%)
84.5
Duplicates removed (%)
40.0
Number of peaks
896 (qval < 1E-05)

Base call quality data from DBCLS SRA