SRX17010397
GSM6439266: ChIPseq MAF H929 rep1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MAF

Cell type

Cell type Class
Blood
Cell type
NCI-H929
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
H929
cell type
Multiple myeloma cell line
cell line
H929
treatment
no treatment
antibody
anti-MAF
geo_loc_name
missing
collection_date
missing

Sequenced DNA Library

library_name
GSM6439266
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
NEBNext Ultra II ChIP-seq Library Prep Master Mix (NEB)

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
18764276
Reads aligned (%)
94.0
Duplicates removed (%)
5.0
Number of peaks
1236 (qval < 1E-05)

hg19

Number of total reads
18764276
Reads aligned (%)
93.5
Duplicates removed (%)
5.8
Number of peaks
1283 (qval < 1E-05)

Base call quality data from DBCLS SRA