Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Thymus
NA
NA

Attributes by original data submitter

Sample

source_name
whole thymocyte, fixed with formaldehyde
strain
C57BL/6
tissue
thymocyte
age
adult (11 weeks)
Sex
male
genotype
wild type
antibody
NULL

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18731832
Reads aligned (%)
96.8
Duplicates removed (%)
39.3
Number of peaks
9678 (qval < 1E-05)

mm9

Number of total reads
18731832
Reads aligned (%)
96.3
Duplicates removed (%)
39.4
Number of peaks
9613 (qval < 1E-05)

Base call quality data from DBCLS SRA