SRX1657695
GSM2097800: ∆Liz Input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
E14 mouse embryonic stem cells
cell-type
delta-Liz ground-state ESC

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were obtained from cross-linked nuclei, and chromatin was immunopreciptated with antibodies against H3K27me3

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
31467692
Reads aligned (%)
98.7
Duplicates removed (%)
17.0
Number of peaks
367 (qval < 1E-05)

mm9

Number of total reads
31467692
Reads aligned (%)
98.5
Duplicates removed (%)
17.0
Number of peaks
353 (qval < 1E-05)

Base call quality data from DBCLS SRA