Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat5a

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
pro-B Ba/F3_ChIP_STAT5Aplus
cell line
pro-B Ba/F3 cell line
condition
IL3 deprivation for 6h and IL3 stimulation for 30min
chip antibody
STAT5a (Santa Cruz, sc1081X)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
18688085
Reads aligned (%)
40.9
Duplicates removed (%)
47.5
Number of peaks
5091 (qval < 1E-05)

mm9

Number of total reads
18688085
Reads aligned (%)
40.9
Duplicates removed (%)
47.9
Number of peaks
5098 (qval < 1E-05)

Base call quality data from DBCLS SRA