Antigen

Antigen Class

TFs and others

Antigen

CTCF

Cell type

Cell type Class

Blood

Cell type

B cells

NA

NA

Sample

age

22 year

sample type

primary cell

cell type

activated B cell

sex

male

dev stage

adult

donor ID

ENCDO383AQS

lab

Bradley Bernstein, Broad

source

Charles Lee

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/be2a0f12-af38-430c-8f2d-57953baab5f5/@@download/attachment/Epigenomics_Alternative_Mag_Bead_ChIP_Protocol_v1.1_exp.pdf

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

6422261

Reads aligned (%)

66.8

Duplicates removed (%)

5.0

Number of peaks

147 (qval < 1E-05)

hg19

Number of total reads

6422261

Reads aligned (%)

66.0

Duplicates removed (%)

6.0

Number of peaks

165 (qval < 1E-05)