SRX16349632
GSM6355449: C4-2 AR; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
C4-2
Tissue
Prostate
Cell Type
Epithelial
Disease
Prostate Cancer

Attributes by original data submitter

Sample

source_name
C4-2 Cells
cell line
C4-2
chip antibody
anti-AR

Sequenced DNA Library

library_name
GSM6355449
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Qiagen PCR kit KAPA Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29780149
Reads aligned (%)
100.0
Duplicates removed (%)
0.0
Number of peaks
43909 (qval < 1E-05)

hg19

Number of total reads
29780149
Reads aligned (%)
100.0
Duplicates removed (%)
0.0
Number of peaks
43936 (qval < 1E-05)

Base call quality data from DBCLS SRA