Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
Morula
MeSH Description
An early embryo that is a compact mass of about 16 BLASTOMERES. It resembles a cluster of mulberries with two types of cells, outer cells and inner cells. Morula is the stage before BLASTULA in non-mammalian animals or a BLASTOCYST in mammals.

Attributes by original data submitter

Sample

source_name
mouse embryo
development stage
morula embryo
chip antibody
H3K4me3(Cell signaling Technology, #9727)
overexpression
B6D2F1 (C57BL/6×DBA/2)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
19839215
Reads aligned (%)
98.9
Duplicates removed (%)
10.4
Number of peaks
191 (qval < 1E-05)

mm9

Number of total reads
19839215
Reads aligned (%)
98.8
Duplicates removed (%)
10.4
Number of peaks
169 (qval < 1E-05)

Base call quality data from DBCLS SRA