SRX160846
GSM970260: PolII-A (HiSeq 2000); Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Human primary adult proerythroblasts (ProEs)
tissue
CD34+ HSPC-derived proerythroblasts
developmental stage
adult bone marrow
chip antibody
PolII
vendor
Santa Cruz Biotechnology

Sequenced DNA Library

library_name
GSM970260: PolII-A (HiSeq 2000)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
106164823
Reads aligned (%)
88.7
Duplicates removed (%)
34.0
Number of peaks
30634 (qval < 1E-05)

hg19

Number of total reads
106164823
Reads aligned (%)
88.0
Duplicates removed (%)
34.5
Number of peaks
30428 (qval < 1E-05)

Base call quality data from DBCLS SRA