SRX160815
GSM970222: E36 Eed -/- H3K27ac; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
E36 ES cells
strain
129/Ola
cell type
E36 ES cells (Abcam, cat No:4729, Lot: GR55451-1)
chip antibody
H3K27ac

Sequenced DNA Library

library_name
GSM970222: E36_Eed_-/-_H3K27ac
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
38252285
Reads aligned (%)
98.5
Duplicates removed (%)
3.3
Number of peaks
1960 (qval < 1E-05)

mm9

Number of total reads
38252285
Reads aligned (%)
98.5
Duplicates removed (%)
3.3
Number of peaks
2016 (qval < 1E-05)

Base call quality data from DBCLS SRA