SRX160812
GSM970219: E36 Eed +/+ Input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
E36 ES cells
strain
129/Ola
cell type
E36 ES cells
chip antibody
none

Sequenced DNA Library

library_name
GSM970219: E36_Eed_+/+_Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
40027401
Reads aligned (%)
97.5
Duplicates removed (%)
14.3
Number of peaks
388 (qval < 1E-05)

mm9

Number of total reads
40027401
Reads aligned (%)
97.3
Duplicates removed (%)
14.4
Number of peaks
374 (qval < 1E-05)

Base call quality data from DBCLS SRA