SRX1600287
ChIP-Seq H3K4me3 on Dm mito-line CA replicate #1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Adult body
NA
NA

Attributes by original data submitter

Sample

breed
CA
isolation_source
mito-line
collection_date
2015-04
geo_loc_name
Germany: Dresden
tissue
Whole organism
sex
female

Sequenced DNA Library

library_name
CA1 ChIP-Seq H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
778949
Reads aligned (%)
67.6
Duplicates removed (%)
65.1
Number of peaks
225 (qval < 1E-05)

dm3

Number of total reads
778949
Reads aligned (%)
67.7
Duplicates removed (%)
63.9
Number of peaks
313 (qval < 1E-05)

Base call quality data from DBCLS SRA