Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.Z.1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
4-HK-H2A-Z-1-IP-rep2
cell line
HeLa Kyoto cells
chip antibody
ChromoTek GFP-trap
experimental batch
2

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
38505826
Reads aligned (%)
99.4
Duplicates removed (%)
5.1
Number of peaks
1326 (qval < 1E-05)

hg19

Number of total reads
38505826
Reads aligned (%)
98.7
Duplicates removed (%)
6.9
Number of peaks
1234 (qval < 1E-05)

Base call quality data from DBCLS SRA