Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF3

Cell type

Cell type Class
Blood
Cell type
RPMI 8402
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
T-ALL cell line, E2A ChIP
cell line
RPMI-8402
cell type
T-cell acute lymphoblastic leukemia (T-ALL) cells
chip antibody
TCF3/E2A
antibody vendor
Santa Cruz

Sequenced DNA Library

library_name
GSM957607: E2A RPMI-8402_ChipSeq, rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
14330002
Reads aligned (%)
70.9
Duplicates removed (%)
17.0
Number of peaks
11138 (qval < 1E-05)

hg38

Number of total reads
14330002
Reads aligned (%)
72.0
Duplicates removed (%)
16.3
Number of peaks
11055 (qval < 1E-05)

Base call quality data from DBCLS SRA