Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Muscle

Cell type

Psoas Muscles

MeSH Description

A powerful flexor of the thigh at the hip joint (psoas major) and a weak flexor of the trunk and lumbar spinal column (psoas minor). Psoas is derived from the Greek "psoa", the plural meaning "muscles of the loin". It is a common site of infection manifesting as abscess (PSOAS ABSCESS). The psoas muscles and their fibers are also used frequently in experiments in muscle physiology.

Sample

MOLECULE

genomic DNA

DISEASE

None

BIOMATERIAL_PROVIDER

Shin Lin, Stanford University

BIOMATERIAL_TYPE

Primary Tissue

TISSUE_TYPE

Psoas Muscle

TISSUE_DEPOT

N/A

COLLECTION_METHOD

Autopsy

DONOR_ID

STL003

DONOR_AGE

34

DONOR_HEALTH_STATUS

polysubstance abuse (NO diabetes, hypertension, coronary artery disease, cancer)

DONOR_SEX

male

DONOR_ETHNICITY

Caucasian

sample_term_id

UBERON_0008450

Sequenced DNA Library

library_name

A292

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

33623091

Reads aligned (%)

93.5

Duplicates removed (%)

35.1

Number of peaks

1017 (qval < 1E-05)

hg19

Number of total reads

33623091

Reads aligned (%)

93.2

Duplicates removed (%)

35.6

Number of peaks

1129 (qval < 1E-05)