SRX155450
GSM950394: Input MB replicate1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
Growing C1C12 myoblasts
cell type
C2C12
chromatin preparation method
Sonication

Sequenced DNA Library

library_name
GSM950394: Input_MB_replicate1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
23931913
Reads aligned (%)
86.3
Duplicates removed (%)
16.1
Number of peaks
501 (qval < 1E-05)

mm9

Number of total reads
23931913
Reads aligned (%)
86.1
Duplicates removed (%)
16.2
Number of peaks
541 (qval < 1E-05)

Base call quality data from DBCLS SRA