SRX1554066
Murine Trachea p73 ChIP R1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Lung
Cell type
Tracheal epithelium
NA
NA

Attributes by original data submitter

Sample

breed
ND
age
2-6 months
sex
pooled male and female
tissue
tracheal epithelium
genotype
p73+/+
sample_type
p73_ChIP_DNA
ID
2875-JP-2

Sequenced DNA Library

library_name
2875-JP-2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22665076
Reads aligned (%)
62.1
Duplicates removed (%)
32.2
Number of peaks
1012 (qval < 1E-05)

mm9

Number of total reads
22665076
Reads aligned (%)
62.1
Duplicates removed (%)
32.3
Number of peaks
1007 (qval < 1E-05)

Base call quality data from DBCLS SRA