Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Cardiovascular
Cell type
Wharton Jelly
MeSH Description
Jelly-like connective tissue of the UMBILICAL CORD that contains MESENCHYMAL STROMAL CELLS.

Attributes by original data submitter

Sample

source_name
umbilical cord wharton's jelly
chip antibody
H3K27ac (2ug Abcam, AB4729)
number of cells
1.5 million
cell type
Mesenchymal stem cells
agasga
AGA

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
25528204
Reads aligned (%)
97.8
Duplicates removed (%)
4.7
Number of peaks
19523 (qval < 1E-05)

hg19

Number of total reads
25528204
Reads aligned (%)
97.2
Duplicates removed (%)
5.8
Number of peaks
19536 (qval < 1E-05)

Base call quality data from DBCLS SRA