Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Gmnn

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse embriyonic stem cell
cell type
Mouse embriyonic stem cell
chip antibody
Gmnn

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by submitter none provided by submitter

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
40989947
Reads aligned (%)
86.4
Duplicates removed (%)
33.4
Number of peaks
12268 (qval < 1E-05)

mm9

Number of total reads
40989947
Reads aligned (%)
85.9
Duplicates removed (%)
33.3
Number of peaks
12202 (qval < 1E-05)

Base call quality data from DBCLS SRA