SRX1548136
GSM2046616: ES TY1 input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse embriyonic stem cell
cell type
Mouse embriyonic stem cell
chip antibody
input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
none provided by submitter none provided by submitter

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
33725186
Reads aligned (%)
86.9
Duplicates removed (%)
34.7
Number of peaks
8935 (qval < 1E-05)

mm9

Number of total reads
33725186
Reads aligned (%)
86.5
Duplicates removed (%)
34.6
Number of peaks
8947 (qval < 1E-05)

Base call quality data from DBCLS SRA