Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Bisulfite-Seq
Antigen
Bisulfite-Seq

Cell type

Cell type Class
Lung
Cell type
Lung
MeSH Description
Either of the pair of organs occupying the cavity of the thorax that effect the aeration of the blood.

Attributes by original data submitter

Sample

source_name
healthy lung tissue
genotype/variation
Control

Sequenced DNA Library

library_name
GSM946855: Healthy lung tissue
library_strategy
Bisulfite-Seq
library_source
GENOMIC
library_selection
RANDOM

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
176609911
Reads aligned (%)
87.8
Coverage rate (×)
4.2
Number of hyper MRs
293735 (qval < 1E-05)

mm9

Number of total reads
176609911
Reads aligned (%)
89.1
Coverage rate (×)
4.2
Number of hyper MRs
293029 (qval < 1E-05)

Base call quality data from DBCLS SRA