Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
MUTZ-3
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
Mutz3_DMSO
cell line
Mutz3
cell type
human myeloid leukemia cell line with high MN1 expression
genotype
non-MLL-rearranged
chip-antibody
Abcam anti-H3K79me2 (ab3594)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was isolated using standard ChIP protocol Nugen Ovation Ultra low system V2

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
46482644
Reads aligned (%)
99.1
Duplicates removed (%)
1.6
Number of peaks
765 (qval < 1E-05)

hg19

Number of total reads
46482644
Reads aligned (%)
98.6
Duplicates removed (%)
2.4
Number of peaks
966 (qval < 1E-05)

Base call quality data from DBCLS SRA