Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PAF1

Cell type

Cell type Class
Blood
Cell type
RS4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
Leukemia cell line (RS4;11)
treatment
N/A
cell type
Pro B-cell line derived from ALL with t(4;11)(q21;q23) translocation
chip antibody
Bethyl A300-172A
geo_loc_name
missing
collection_date
missing

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
41369855
Reads aligned (%)
98.2
Duplicates removed (%)
34.8
Number of peaks
514 (qval < 1E-05)

hg19

Number of total reads
41369855
Reads aligned (%)
97.1
Duplicates removed (%)
35.4
Number of peaks
337 (qval < 1E-05)

Base call quality data from DBCLS SRA