Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
yki

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
8-16hr embryo ChIP; Iso1 strain; Yki antibody
strain
Iso1
developmental stage
Embryo, 8-16hr
tissue
Whole embryo
antibody
anti-Yki

Sequenced DNA Library

library_name
GSM945887: Yki embryo ChIP, replicate3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
14356190
Reads aligned (%)
72.2
Duplicates removed (%)
25.3
Number of peaks
1810 (qval < 1E-05)

dm6

Number of total reads
14356190
Reads aligned (%)
66.6
Duplicates removed (%)
30.0
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA