SRX151961
GSM945562: Cl8-PolII ChipSeq IP1 extraction1 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Larvae
Cell type
Dorsal mesothoracic disc
NA
NA

Attributes by original data submitter

Sample

source_name
Cl8-PolII_ChipSeq_IP1
cell line
CME-W1-Cl.8+
tissue
dorsal mesothoracic disc
developmental stage
third instar larval stage
Sex
male

Sequenced DNA Library

library_name
GSM945562: Cl8-PolII_ChipSeq_IP1 extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
5743774
Reads aligned (%)
94.4
Duplicates removed (%)
13.3
Number of peaks
672 (qval < 1E-05)

dm3

Number of total reads
5743774
Reads aligned (%)
95.2
Duplicates removed (%)
10.1
Number of peaks
1853 (qval < 1E-05)

Base call quality data from DBCLS SRA