SRX151956
GSM945557: Cl8-ORC ChIP-Seq IP1 extraction1 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Orc2

Cell type

Cell type Class
Larvae
Cell type
Dorsal mesothoracic disc
NA
NA

Attributes by original data submitter

Sample

source_name
Cl8-ORC_ChIP-Seq_IP1
cell line
CME-W1-Cl.8+
tissue
dorsal mesothoracic disc
developmental stage
third instar larval stage
Sex
male

Sequenced DNA Library

library_name
GSM945557: Cl8-ORC_ChIP-Seq_IP1 extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
7687834
Reads aligned (%)
93.8
Duplicates removed (%)
10.2
Number of peaks
4625 (qval < 1E-05)

dm3

Number of total reads
7687834
Reads aligned (%)
94.2
Duplicates removed (%)
7.7
Number of peaks
4266 (qval < 1E-05)

Base call quality data from DBCLS SRA