SRX151897
GSM945521: HUVEC H3K27Ac DMSO 24hr normoxia; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HUVECs
cell type
Human umbilical vein cells
passage
within 6 passage
treatment
normoxia 24h
chip antibody
H3K27Ac

Sequenced DNA Library

library_name
GSM945521: HUVEC H3K27Ac DMSO 24hr normoxia
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
31316199
Reads aligned (%)
91.8
Duplicates removed (%)
16.5
Number of peaks
62588 (qval < 1E-05)

hg19

Number of total reads
31316199
Reads aligned (%)
91.5
Duplicates removed (%)
16.7
Number of peaks
62429 (qval < 1E-05)

Base call quality data from DBCLS SRA