Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Pluripotent stem cell

Cell type

mESC derived neural cells

NA

NA

Sample

source_name

neuroepithelia cells

cell type

ES-derived neural neuroepithelia cells

passages

15-18

strain

D3

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Chromatin were sheared to fragements by using sonication,then protein-DNA complexes were isolated with antibody GFP. Libraries were prepared for sequencing using standard Illumina protocols.

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

43845435

Reads aligned (%)

89.4

Duplicates removed (%)

13.2

Number of peaks

1558 (qval < 1E-05)

mm9

Number of total reads

43845435

Reads aligned (%)

89.2

Duplicates removed (%)

13.3

Number of peaks

1594 (qval < 1E-05)