Antigen

Antigen Class

Histone

Antigen

H3K4me2

Cell type

Cell type Class

Neural

Cell type

Retina

MeSH Description

The ten-layered nervous tissue membrane of the eye. It is continuous with the OPTIC NERVE and receives images of external objects and transmits visual impulses to the brain. Its outer surface is in contact with the CHOROID and the inner surface with the VITREOUS BODY. The outer-most layer is pigmented, whereas the inner nine layers are transparent.

Sample

source_name

retina

strain

Pde6b (rd1/rd1) mutant mice

chip antibody

H3K4me2 (07-449, Upstate, Charlottesville, VA, lot 26335, cat#07-030)

developmental stage

P30

tissue

retina

Sequenced DNA Library

library_name

GSM943608: H3K4me2_PN30_ChIPSeq

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

mm10

Number of total reads

11326976

Reads aligned (%)

75.8

Duplicates removed (%)

5.8

Number of peaks

1175 (qval < 1E-05)

mm9

Number of total reads

11326976

Reads aligned (%)

75.7

Duplicates removed (%)

5.9

Number of peaks

1198 (qval < 1E-05)