Antigen

Antigen Class

TFs and others

Antigen

MECOM

Cell type

Cell type Class

Blood

Cell type

Acute myeloid leukemia

NA

NA

Sample

source_name

acute myeloid leukemia cell line

rearrangement of chromosome 3q

Yes, t(3;3)(q21;q26)

sf3b1 mutations

Yes, K700E

chip antibody

Anti-EVI1 (Cell Signaling, 2593)

Sequenced DNA Library

library_name

GSM6106333

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Nuclear lysates were sonicated and pulled down with antibody. ChIP samples were processed according to the Illumina TruSeq ChIP Sample Preparation Protocol (Illumina) or Diagenode Library V3 preparation protocol (Diagenode) and either sequenced single-end (1 × 50 bp) on the HiSeq 2500 platform (Illumina) or paired-end (2 × 100 bp) on the Novaseq 6000 platform (Illumina)

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

193075142

Reads aligned (%)

99.7

Duplicates removed (%)

79.3

Number of peaks

19294 (qval < 1E-05)

hg19

Number of total reads

193075142

Reads aligned (%)

99.7

Duplicates removed (%)

79.6

Number of peaks

19025 (qval < 1E-05)