SRX1509166
Genome-wide analyses of P300 (24h ATRA 1uM) binding sites in mouse embryonic stem cell

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/6J

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
48726494
Reads aligned (%)
97.5
Duplicates removed (%)
37.3
Number of peaks
288 (qval < 1E-05)

mm9

Number of total reads
48726494
Reads aligned (%)
97.3
Duplicates removed (%)
37.4
Number of peaks
329 (qval < 1E-05)

Base call quality data from DBCLS SRA