Antigen

Antigen Class

Histone

Antigen

H3K4me3

Cell type

Cell type Class

Blood

Cell type

Macrophages

MeSH Description

The relatively long-lived phagocytic cell of mammalian tissues that are derived from blood MONOCYTES. Main types are PERITONEAL MACROPHAGES; ALVEOLAR MACROPHAGES; HISTIOCYTES; KUPFFER CELLS of the liver; and OSTEOCLASTS. They may further differentiate within chronic inflammatory lesions to EPITHELIOID CELLS or may fuse to form FOREIGN BODY GIANT CELLS or LANGHANS GIANT CELLS. (from The Dictionary of Cell Biology, Lackie and Dow, 3rd ed.)

Sample

source_name

Primary bone marrow-derived macrophages (BMDM)

strain

C57BL/6

cell type

BMDM cells (7th day of differentiation)

antibody

Anti-H3K4me3 (Active Motif #39159)

treatment

No treatment

Sequenced DNA Library

library_name

GSM940913: H3K4me3_UT

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

31444999

Reads aligned (%)

72.6

Duplicates removed (%)

34.0

Number of peaks

25363 (qval < 1E-05)

mm9

Number of total reads

31444999

Reads aligned (%)

72.5

Duplicates removed (%)

34.1

Number of peaks

25465 (qval < 1E-05)