Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZNF263

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HEK293-T-REx
biomaterial_provider
Invitrogen
lab
USC
lab description
Farnham - University of Southern California
datatype
ChipSeq
datatype description
Chromatin IP Sequencing
cell
HEK293-T-REx
cell organism
human
cell description
embryonic kidney cells transformed with Adenovirus 5 DNA stably expressing tetracycline repressor, HEK293 (ATCC number CRL-1573) is the parental cell line, hypotriploid, XXX
cell karyotype
cancer
cell lineage
mesoderm
cell sex
F
treatment
None
treatment description
No special treatment or protocol applies
antibody
ZNF263
antibody antibodydescription
Mouse polyclonal. Antibody Target: ZNF263
antibody targetdescription
ZNF263 (NP_005732, 201 a.a. ~ 299 a.a) partial recombinant protein with GST tag.
antibody vendorname
Novus Biologicals
antibody vendorid
H00010127-A01
control
UCDavis
control description
Input library was prepared at UC Davis.
control
UCDavis
control description
Input library was prepared at UC Davis.
controlid
wgEncodeEH001784
replicate
1

Sequenced DNA Library

library_name
GSM935577: USC_ChipSeq_HEK293-T-REx_ZNF263_UCDavis
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
66565768
Reads aligned (%)
63.9
Duplicates removed (%)
5.0
Number of peaks
47845 (qval < 1E-05)

hg38

Number of total reads
66565768
Reads aligned (%)
64.7
Duplicates removed (%)
4.3
Number of peaks
46903 (qval < 1E-05)

Base call quality data from DBCLS SRA