SRX150050
GSM938101: 0-2hr Embryo ORC Chip-Seq extraction2 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Orc2

Cell type

Cell type Class
Embryo
Cell type
0-2h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
0-2hr Embryo ORC Chip-Seq
developmental stage
Embryo 0-2h

Sequenced DNA Library

library_name
GSM938101: 0-2hr Embryo ORC Chip-Seq extraction2_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
4609838
Reads aligned (%)
94.5
Duplicates removed (%)
25.8
Number of peaks
1247 (qval < 1E-05)

dm3

Number of total reads
4609838
Reads aligned (%)
95.0
Duplicates removed (%)
22.5
Number of peaks
1146 (qval < 1E-05)

Base call quality data from DBCLS SRA