Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Bone
Cell type
Osteoblasts
NA
NA

Attributes by original data submitter

Sample

source_name
Primary osteoblasts
cell type
Calvarial osteoblasts
age
P1
strain
C57BL/6
genotype
wild-type
chip antibody
FLAG M2 antibody (Sigma, F1804)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
35628029
Reads aligned (%)
91.9
Duplicates removed (%)
45.0
Number of peaks
479 (qval < 1E-05)

mm9

Number of total reads
35628029
Reads aligned (%)
91.6
Duplicates removed (%)
45.0
Number of peaks
512 (qval < 1E-05)

Base call quality data from DBCLS SRA