SRX148962
GSM935135: P4936 T0 CDK9; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CDK9

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
Cdk9
cell type
P493-6
time
0 hr

Sequenced DNA Library

library_name
GSM935135: P4936_T0_CDK9
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
41403131
Reads aligned (%)
92.3
Duplicates removed (%)
14.8
Number of peaks
987 (qval < 1E-05)

hg19

Number of total reads
41403131
Reads aligned (%)
91.2
Duplicates removed (%)
15.8
Number of peaks
1367 (qval < 1E-05)

Base call quality data from DBCLS SRA