SRX148831
GSM932959: H3K9ac ChIP-seq mature B [8059], 1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9ac

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature B
genotype
WT
extraction method
Ex vivo
tissue
Lymph Nodes
strain
C57BL/6
antibody
H3K9ac Ab (Upstate 07-352, LOT# DAM1394804)

Sequenced DNA Library

library_name
GSM932959: H3K9ac ChIP-seq mature B [8059], 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
2126992
Reads aligned (%)
32.4
Duplicates removed (%)
5.2
Number of peaks
112 (qval < 1E-05)

mm9

Number of total reads
2126992
Reads aligned (%)
32.4
Duplicates removed (%)
5.8
Number of peaks
118 (qval < 1E-05)

Base call quality data from DBCLS SRA