SRX1482308
rB WT HMGN1 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/6
age
8-12 weeks
sex
N/A
tissue
B cell
biomaterial_provider
Michael Bustin, NIH/NCI
sample_type
ChIP-seq

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
34149747
Reads aligned (%)
99.4
Duplicates removed (%)
3.9
Number of peaks
18117 (qval < 1E-05)

mm9

Number of total reads
34149747
Reads aligned (%)
99.4
Duplicates removed (%)
3.9
Number of peaks
18130 (qval < 1E-05)

Base call quality data from DBCLS SRA