SRX147737
GSM929902: FAIRE EB Indiv-A-B; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Umbilical cord blood
NA
NA

Attributes by original data submitter

Sample

source_name
Umbilical cord blood
cell type
Erythroblasts
individual/replicate
Indiv-A + Indiv-B
f-seq parameter
8

Sequenced DNA Library

library_name
GSM929902: FAIRE_EB_Indiv-A-B
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
23435225
Reads aligned (%)
97.6
Duplicates removed (%)
47.5
Number of peaks
3009 (qval < 1E-05)

hg19

Number of total reads
23435225
Reads aligned (%)
95.0
Duplicates removed (%)
47.3
Number of peaks
2936 (qval < 1E-05)

Base call quality data from DBCLS SRA