SRX146464
GSM928338: Snyder Pdpl1 DPL1 GFP L1 rep1 extraction1 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
dpl-1

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_Pdpl1_DPL1_GFP_L1_rep1
strain
YL425(official name : YL425 genotype : unc-119(ed3) III; vrIs69[pDPL-1::DPL-1::GFP FLAG: DPL-1 3?UTR genotype : unc-119 (+)] outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : made_by : )
developmental stage
fed L1
genotype
unc-119(ed3) III; vrIs69[pDPL-1::DPL-1::GFP FLAG: DPL-1 3?UTR
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM928338: Snyder_Pdpl1_DPL1_GFP_L1_rep1 extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
2341051
Reads aligned (%)
89.8
Duplicates removed (%)
26.0
Number of peaks
4293 (qval < 1E-05)

ce10

Number of total reads
2341051
Reads aligned (%)
89.8
Duplicates removed (%)
26.0
Number of peaks
4295 (qval < 1E-05)

Base call quality data from DBCLS SRA