SRX146463
GSM928337: Snyder Pdpl1 DPL1 Input L1 rep2 extraction2 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
L1
NA
NA

Attributes by original data submitter

Sample

source_name
Snyder_Pdpl1_DPL1_Input_L1_rep2
strain
YL425(official name : YL425 genotype : unc-119(ed3) III; vrIs69[pDPL-1::DPL-1::GFP FLAG: DPL-1 3?UTR genotype : unc-119 (+)] outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : made_by : )
developmental stage
fed L1
genotype
unc-119(ed3) III; vrIs69[pDPL-1::DPL-1::GFP FLAG: DPL-1 3?UTR
Sex
hermaphrodite

Sequenced DNA Library

library_name
GSM928337: Snyder_Pdpl1_DPL1_Input_L1_rep2 extraction2_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5483089
Reads aligned (%)
35.3
Duplicates removed (%)
5.0
Number of peaks
205 (qval < 1E-05)

ce10

Number of total reads
5483089
Reads aligned (%)
35.3
Duplicates removed (%)
5.0
Number of peaks
205 (qval < 1E-05)

Base call quality data from DBCLS SRA